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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.V94FJ | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | MYB_related | ||||||||
Protein Properties | Length: 541aa MW: 61014.2 Da PI: 5.8203 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.5 | 2.6e-07 | 476 | 527 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg....tWktIartmg....kgRtlkqcksrwqky 47 WT+eE+++l ++v ++ ++ W++I + k+R++ ++k++w++ Aradu.V94FJ 476 WTAEEEKILQEGVLRFSKEnqriPWNRILEFGRhvfdKTRSPIDLKDKWRNI 527 *****************99**********9998*****************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57903 | 6.42E-7 | 119 | 174 | IPR011011 | Zinc finger, FYVE/PHD-type |
Gene3D | G3DSA:3.30.40.10 | 1.3E-7 | 120 | 170 | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
PROSITE pattern | PS01359 | 0 | 123 | 166 | IPR019786 | Zinc finger, PHD-type, conserved site |
SMART | SM00717 | 0.0073 | 472 | 530 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.7E-6 | 475 | 529 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.04E-8 | 476 | 532 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50090 | 6.47 | 476 | 528 | IPR017877 | Myb-like domain |
CDD | cd11660 | 1.46E-10 | 476 | 529 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 541 aa Download sequence Send to blast |
MRIKTRGGRR RLSCSADPPS PITKQDEYVA AELEISHGGG GDDAKDAPMV DCIDQHYNEN 60 HLDVLNHEQD KNCATEFETS HGGGDDDNVK DVLTVECIDQ HYNENPLDIL DHEDIDFLDK 120 SICLCCNKRG GVLVCSGSGC PVGLHPKCIN SEPKFDDLGK FYCPYCWYSR NVNMNPELKE 180 RIFSAKNALL GLSDKDVVMN DRLVKTKSAD KRKEPDDGGG IPLSSDGRQG TDEVGAQLLQ 240 PKVDLPIKLQ KDASVQCDIA LEDQAYSDGD FRSCGEEVMP VDINLVEGSL DQDKFDRPGK 300 VEKSLELKES FETGNSRLNK EDVHERIING REEGGHLDAL HLGKHIEGHS KDIAFAQGTQ 360 ESSVKSGDKG RKTGKEKIPL KENEESAIGS SVNETNNSDS DAISGRSCCS KRKIQKTEYP 420 QDVYKKPLLQ GNNFKEEKGS DINEEVTSCR FRRRSQSSQK QEIKKFPLAR RNMLIWTAEE 480 EKILQEGVLR FSKENQRIPW NRILEFGRHV FDKTRSPIDL KDKWRNIKKG SFRYFQIYQK 540 I |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015971788.1 | 0.0 | PREDICTED: uncharacterized protein LOC107495194 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12055 | 20 | 22 |